Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891575.1_cds_XP_016446411.1_41269
CDS Infomation

[gene=LOC107771537] [db_xref=GeneID:107771537] [protein=endonuclease MutS2-like] [protein_id=XP_016446411.1] [location=join(35157..35653,36171..37104,37260..37784,38223..38672,39364..39684)] [gbkey=CDS]
Sequence

ATGAACCTCTTCAACTGCAAATTCAACAACACTCTCTTCACCAATCATCTTCCTCCACGT
CACACCTCGCTCTACAACCCTCGTGCAACTCGGTCCTCCGTCCGCTTCTCATCCGAGTCA
ACTCACAGAGTCAAACTCGCCGAGTCACTCCAATCCGAGACCCTGAAGCTTCTAGAATGG
CCCGCCGTCTGTGGCCAGCTCTCCGCCTTCACTTCCACATCCATGGGCTTCGCTGCCGCA
CAATCTGCTGTGATTCCGGTGGGTAAAACTCCTGAAGAGAGCGGGAAACTCCTCTCTCAG
ACCTCCGCCGCCGTGGCAGTTCCTCGGCCGTTGGATTTCTCCGGAATTGAGGATGTTTCC
CCTATTGTTAATGCTTCCATTGCCGGCGGAGTACTCTCAATTCGTGAGCTTTGCTCTGTG
AAACGGACCTTGGGAGCGGCGAGGCTTTTGCTCCAACAGTTGGAGGAAATTGCTTCGCTG
AATGATTTTTCTGACAGGTACTCTCCTCTGAAGGAAATTCTTCACAATTGTGATTTTCTT
GTGGAATTGGAGCAAAAAATAGAATTCTGTATTGATTGCAGCTTTTCAGCAATCCTTGAC
AGAGCTAGTGAAGATTTGGAAATTATAAGGTCTGAGAGAAAACGGAACATGGAAAATCTA
GAATCATTGTTGAAGCAATTATCAACTCAAGTTTTTCAGGGTGGGGGATTTGACAGACCT
TTAGTAACCAAGCGCCGTTCAAGAATGTGTGTTGCTGTCAGAGCTTCCCATAGATCTTTG
CTTCCTAATGCCGTAATCCTAGATACGAGCAGTAGTGGATCTACATACTTCATGGAACCT
AAAGAGGCAGTTGAGTTGAACAACATGGAAGTTAAGCTTTCCAGTTCTGAGAGGATTGAG
GAGCAAACAATTTTGAGTTTGCTTACATCTGAAATAGCTGAATCTAATATGAAAATAAAA
CACTTATTAGATAGAATATTAGAAATTGATCTTGCATTTGCAAGAGCTGCTCATGCTCAG
TGGATAGGTGGTGCCTGTCCAGCTTTAAGTTCAAGAAATTGTAACAATTCCCAATCTGAA
CTTTTATCTATAGATGTAGAAGGGATACGGCATCCATTGCTTCTTGAGTCCTCTTTGAGA
AACTTGTCCACTGATGTGTCCCCAAGGTCGCCTGATTTGGATCAGGGAAATGGTGTCATG
AATTTTAAAACAAAATCTCGTGCACGTTTCCCTGTGCCCATCGATATTAAAGTTGGTCAT
GGAACAAAGGTTGTTGTCATCTCGGGCCCTAATACTGGAGGGAAAACGGCTTCAATGAAG
ACTCTAGGACTGGCTTCTATGATGTTGAAAGCCGGTATGTATTTGCCTGCCCAAAATCAA
CCACGGCTTCCATGGTTTGATCTCATTCTGGCAGACATAGGAGACCAGCAGTCTCTGGAA
CAAAGTCTGTCAACCTTTAGTGGGCACATTTCACGGCTTCGTGAGATTCTGGAAGTCGCT
TCTAGAGAATCTTTAGTTCTTATTGATGAAATCGGAAGCGGGACCGATCCTTCAGAAGGT
GTAGCACTTTCAGAAAGCATTCTGCAATATCTCAAGGACAGGGTTAATTTAGCTGTTATA
ACTACCCACTATGCAGATCTAACTCGCTTAAAAGAAAAGGACAATAGGTTTGAAACTGCA
GCAACAGAGTTTTCCTTGGAGACTCTACAGCCTACCTATCGGATTCTTTGGGGAAGCAAG
GGAGAATCGAATGCCTTAAATATTGCAAAATCAATGGGCTTTGATGAAAGAATAATTGAC
CGAGCAGTATTATGGGTGAACAAATTGACACCGGACAAGCAGCAGGAGCAGAAGGGATTA
CTTTATCGTTCACTAATTGAAGAAAGGGACAGACTAGAATATCAAGCAATGGAAGTTGCT
TCTCTTCATTCAGATATTATGAACATTTATAATGAGATCAACAAGGAAGCACAAGATCTA
GAGGGACGTGAAGCAGCTATCAAAGCAAAGGAAACGCATGAAATCCAACAGGAAGTGAGG
ACTGTGAAAAATGAGATCCACACTATAGTAGAGAAGTTTGAGAGCCAACTCAGAAATGCA
AGTGCTGACGAGATTAATCCACTTGTGAAAAAAGCTGAATCTGCTATTGCATCGATAGTT
GAAGCTCATCAGCCTAGTAAAGATTTTCTTTTCAGAGAAATAGGCCAGAGCCAGTACACA
CCTCAGGTTGGAGAACAAGTATATGTGAAGGCCTTTGGAAATAAGTTAGCCACTGTAGTT
GAGGAACCTGGGGATGATGACAGTATCCTTGTTCAATATGGGAAAATCAGAGTCCGCGTG
GACAAACGTAGTATAAGACCCATTCCCGCTGATGCTTCTTCCAGTGCAGCTGTCCTGAAA
ACCCAGGTTCAGCGGATCAGGAGTCTTAGGGACCTTGGAGGTCTCTCTAAAGCAAGCAAA
AATCAGCAGGATTCTTATGGCCCTGTGCTGCAGACATCTAAAAACACCATAGACTTGCGT
GGCCTGAGAGTGGAGGATGCTTCGCACCAGCTCAACATGGCTATTGACTCAAGAGCGCCT
AATTCTGTTCTTTTTGTTATTCATGGGATGGGAACTGGGGTTGTAAAAGAATCTGCACAT
AAATTACTAAGAGATCATCCTCGTGTTGTTAAGTTTGAACAGGAAAGTCCTATGAATTAT
GGCTGTACAGTTGCTTATATCAAATGA

Peptide Sequence

PEP ID

XP_016446411.1
PEP Infomation

PREDICTED: endonuclease MutS2-like [Nicotiana tabacum]
Sequence

MNLFNCKFNNTLFTNHLPPRHTSLYNPRATRSSVRFSSESTHRVKLAESLQSETLKLLEW
PAVCGQLSAFTSTSMGFAAAQSAVIPVGKTPEESGKLLSQTSAAVAVPRPLDFSGIEDVS
PIVNASIAGGVLSIRELCSVKRTLGAARLLLQQLEEIASLNDFSDRYSPLKEILHNCDFL
VELEQKIEFCIDCSFSAILDRASEDLEIIRSERKRNMENLESLLKQLSTQVFQGGGFDRP
LVTKRRSRMCVAVRASHRSLLPNAVILDTSSSGSTYFMEPKEAVELNNMEVKLSSSERIE
EQTILSLLTSEIAESNMKIKHLLDRILEIDLAFARAAHAQWIGGACPALSSRNCNNSQSE
LLSIDVEGIRHPLLLESSLRNLSTDVSPRSPDLDQGNGVMNFKTKSRARFPVPIDIKVGH
GTKVVVISGPNTGGKTASMKTLGLASMMLKAGMYLPAQNQPRLPWFDLILADIGDQQSLE
QSLSTFSGHISRLREILEVASRESLVLIDEIGSGTDPSEGVALSESILQYLKDRVNLAVI
TTHYADLTRLKEKDNRFETAATEFSLETLQPTYRILWGSKGESNALNIAKSMGFDERIID
RAVLWVNKLTPDKQQEQKGLLYRSLIEERDRLEYQAMEVASLHSDIMNIYNEINKEAQDL
EGREAAIKAKETHEIQQEVRTVKNEIHTIVEKFESQLRNASADEINPLVKKAESAIASIV
EAHQPSKDFLFREIGQSQYTPQVGEQVYVKAFGNKLATVVEEPGDDDSILVQYGKIRVRV
DKRSIRPIPADASSSAAVLKTQVQRIRSLRDLGGLSKASKNQQDSYGPVLQTSKNTIDLR
GLRVEDASHQLNMAIDSRAPNSVLFVIHGMGTGVVKESAHKLLRDHPRVVKFEQESPMNY
GCTVAYIK

Transcript Sequence

Gene sequence data has not been registered.